Enzyme Reaction Model  

The enzyme reaction rate activity allows students to simulate the effects of variables such as temperature and pH on the reaction rate of the enzyme catalase. This computer simulation is best used after the students have done a wet lab experiment. The value of the simulation is that it requires the students to interpret and analyze the graphical representation of data and it enables the running of mutiple experiments in a short amount of time.

TEACHER RESOURCES

Teacher Materials
Student Activity
Student
   Assessment

Learning
   Goals/Standards


COMPUTER MODELS

Based on a model from Rick Heupel, Tucson, AZ

STELLA Versions Vensim Version

Web-based Simulation

THE MODEL DIAGRAM


THE EQUATIONS
Hydrogen_Peroxide(t) = Hydrogen_Peroxide(t - dt) + (-H2O2_Catalysis_Rate) * dt
INIT Hydrogen_Peroxide = 1*10^(Hydrogen_Peroxide_Exponent)
H2O2_Catalysis_Rate(o) = min(Enzyme_Rate*Available_Enzyme,Hydrogen_Peroxide)
Oxygen(t) = Oxygen(t - dt) + (H2O2_Catalysis_Rate) * dt
INIT Oxygen = 0
H2O2_Catalysis_Rate(i) = H2O2_Catalysis_Rate(o) * CONVERSION MULTIPLIER
CONVERSION MULTIPLIER = 0.5
Water(t) = Water(t - dt) + (H2O2_to_Water_Rate) * dt
INIT Water = 0
H2O2_to_Water_Rate = H2O2_Catalysis_Rate
Available_Enzyme = 5
Enzyme_Rate = 6e6 * pH_Effect*Temperature_Effect
Hydrogen_Peroxide_Exponent = 8
pH = 7.0
Temperature = 20
pH_Effect = GRAPH(pH) (0.00, 0.00), (1.08, 0.00), (2.15, 0.00), (3.23, 0.00), (4.31, 0.2), (5.38, 0.8), (6.46, 1.00), (7.54, 1.00), (8.62, 0.8), (9.69, 0.2), (10.8, 0.00), (11.8, 0.00), (12.9, 0.00), (14.0, 0.00)
Temperature_Effect = GRAPH(Temperature) (0.00, 0.01), (7.14, 0.1), (14.3, 0.5), (21.4, 1.00), (28.6, 1.00), (35.7, 1.00), (42.9, 0.9), (50.0, 0.5), (57.1, 0.005), (64.3, 0.00), (71.4, 0.00), (78.6, 0.00), (85.7, 0.00), (92.9, 0.00), (100.0, 0.00)

THE OUTPUT



Home | Contact | Site Map | Search